STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003151Uncharacterized protein. (353 aa)    
Predicted Functional Partners:
LOC108166170
Uncharacterized protein.
 
    
0.902
MSL3
MSL complex subunit 3.
    
 0.797
ENSPREP00000003105
VWFD domain-containing protein.
 
 
0.690
msl2
MSL complex subunit 2.
    
 0.678
MSL2
MSL complex subunit 2.
    
 0.678
ENSPREP00000019984
VWFD domain-containing protein.
 
 
0.670
Sspo
VWFD domain-containing protein.
 
     
0.651
ENSPREP00000020104
Uncharacterized protein.
 
 
0.631
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
   
 0.606
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.606
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.