STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts14ADAM metallopeptidase with thrombospondin type 1 motif, 14. (1222 aa)    
Predicted Functional Partners:
pald1
Phosphatase domain containing paladin 1a.
   
  
 0.633
stx1b
Syntaxin 1B; Belongs to the syntaxin family.
      
 0.513
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.507
ENSPREP00000026092
Zinc finger protein 646.
      
 0.478
ENSPREP00000026114
Uncharacterized protein.
      
 0.478
LOC103469919
T-cell acute lymphocytic leukemia 2.
      
 0.476
LOC103481737
Syntaxin 4; Belongs to the syntaxin family.
      
 0.475
ccbe1
Collagen and calcium binding EGF domains 1.
      
 0.473
parp2
Poly [ADP-ribose] polymerase.
   
  
 0.431
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.