ENSPREP00000003185 protein (Poecilia reticulata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

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gene fusions

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[Homology]

Score

ENSPREP00000003185

Uncharacterized protein. (211 aa)

Predicted Functional Partners:

trappc1

0.954

trappc2l

0.953

trappc6a

0.951

TRAPPC5

0.949

trappc9

0.946

trappc2

0.944

trappc8

0.944

trappc12

0.939

trappc11

0.925

LOC103457654

0.894

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000003185	LOC103457654	ENSPREP00000003185	ENSPREP00000016092	Uncharacterized protein.	Lebercilin LCA5.	0.894
ENSPREP00000003185	TRAPPC5	ENSPREP00000003185	ENSPREP00000020290	Uncharacterized protein.	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.949
ENSPREP00000003185	trappc1	ENSPREP00000003185	ENSPREP00000012516	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.954
ENSPREP00000003185	trappc11	ENSPREP00000003185	ENSPREP00000033062	Uncharacterized protein.	Trafficking protein particle complex 11.	0.925
ENSPREP00000003185	trappc12	ENSPREP00000003185	ENSPREP00000004768	Uncharacterized protein.	Trafficking protein particle complex 12.	0.939
ENSPREP00000003185	trappc2	ENSPREP00000003185	ENSPREP00000002479	Uncharacterized protein.	Trafficking protein particle complex 2.	0.944
ENSPREP00000003185	trappc2l	ENSPREP00000003185	ENSPREP00000033245	Uncharacterized protein.	Trafficking protein particle complex 2-like.	0.953
ENSPREP00000003185	trappc6a	ENSPREP00000003185	ENSPREP00000031355	Uncharacterized protein.	Trafficking protein particle complex 6b-like.	0.951
ENSPREP00000003185	trappc8	ENSPREP00000003185	ENSPREP00000029899	Uncharacterized protein.	Trafficking protein particle complex 8.	0.944
ENSPREP00000003185	trappc9	ENSPREP00000003185	ENSPREP00000022248	Uncharacterized protein.	Trafficking protein particle complex 9.	0.946
LOC103457654	ENSPREP00000003185	ENSPREP00000016092	ENSPREP00000003185	Lebercilin LCA5.	Uncharacterized protein.	0.894
LOC103457654	TRAPPC5	ENSPREP00000016092	ENSPREP00000020290	Lebercilin LCA5.	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.957
LOC103457654	trappc1	ENSPREP00000016092	ENSPREP00000012516	Lebercilin LCA5.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.945
LOC103457654	trappc11	ENSPREP00000016092	ENSPREP00000033062	Lebercilin LCA5.	Trafficking protein particle complex 11.	0.926
LOC103457654	trappc12	ENSPREP00000016092	ENSPREP00000004768	Lebercilin LCA5.	Trafficking protein particle complex 12.	0.912
LOC103457654	trappc2	ENSPREP00000016092	ENSPREP00000002479	Lebercilin LCA5.	Trafficking protein particle complex 2.	0.944
LOC103457654	trappc2l	ENSPREP00000016092	ENSPREP00000033245	Lebercilin LCA5.	Trafficking protein particle complex 2-like.	0.945
LOC103457654	trappc6a	ENSPREP00000016092	ENSPREP00000031355	Lebercilin LCA5.	Trafficking protein particle complex 6b-like.	0.946
LOC103457654	trappc8	ENSPREP00000016092	ENSPREP00000029899	Lebercilin LCA5.	Trafficking protein particle complex 8.	0.944
LOC103457654	trappc9	ENSPREP00000016092	ENSPREP00000022248	Lebercilin LCA5.	Trafficking protein particle complex 9.	0.944