STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nubplNucleotide binding protein-like. (339 aa)    
Predicted Functional Partners:
twnk
Twinkle mtDNA helicase.
    
 
 0.911
ndufaf7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
     
 0.840
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
     
 0.838
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
     
 0.822
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
     
 0.795
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
  
 0.778
LOC108166662
Uncharacterized protein.
  
 
 0.777
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
  
 
 0.777
ndufaf2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
     
 0.758
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
    
 0.753
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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