STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pusl1tRNA pseudouridine synthase. (295 aa)    
Predicted Functional Partners:
trub2
TruB pseudouridine (psi) synthase family member 2.
   
 0.873
trub1
TruB pseudouridine (psi) synthase family member 1.
   
 0.813
pus7l
Pseudouridine synthase 7 like.
   
 
 0.811
tmem244
Transmembrane protein 244.
      
 0.782
tmem141
Transmembrane protein 141.
      
 0.759
dkc1
Dyskeratosis congenita 1, dyskerin.
   
 0.746
LOC103474722
Uncharacterized protein.
   
 
 0.738
wdr4
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.718
LOC103479383
Uncharacterized protein.
      
 0.713
LOC103465136
RNA pseudouridine synthase D4.
  
  
 0.705
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]