STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
psip1LEDGF domain-containing protein. (392 aa)    
Predicted Functional Partners:
men1
Multiple endocrine neoplasia I.
    
 0.977
HDGF
PWWP domain-containing protein.
 
  
   0.941
kmt2b
Lysine (K)-specific methyltransferase 2Bb.
  
 
 0.931
ENSPREP00000019006
Uncharacterized protein.
    
 0.908
KMT2A
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
    
 0.908
ENSPREP00000003193
PWWP domain-containing protein.
 
 
    0.903
HDGFL3
HDGF like 3.
 
      0.898
LOC103477499
Pogo transposable element derived with ZNF domain b.
   
 
 0.866
ENSPREP00000024181
Pogo transposable element derived with ZNF domain a.
   
 
 0.866
smc3
Structural maintenance of chromosomes protein.
   
   0.775
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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