STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psip1LEDGF domain-containing protein. (392 aa)    
Predicted Functional Partners:
men1
Multiple endocrine neoplasia I.
    
 
 0.948
ENSPREP00000003193
PWWP domain-containing protein.
 
      0.900
HDGFL3
HDGF like 3.
 
      0.898
HDGF
PWWP domain-containing protein.
 
  
   0.848
kmt2b
Lysine (K)-specific methyltransferase 2Bb.
  
 
 
 0.811
LOC103477499
Pogo transposable element derived with ZNF domain b.
    
 
 0.801
ENSPREP00000024181
Pogo transposable element derived with ZNF domain a.
    
 
 0.801
ENSPREP00000019006
Uncharacterized protein.
    
 
 0.748
KMT2A
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
    
 
 0.748
ENSPREP00000018237
PWWP domain-containing protein.
 
  
   0.733
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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