STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)    
Predicted Functional Partners:
LOC103458086
acidPPc domain-containing protein.
    
 0.984
LOC103457586
Si:ch211-212g7.6.
    
 0.984
SGPP2
Sphingosine-1-phosphate phosphatase 2.
    
 0.979
sphk2
Sphingosine kinase 2.
  
 0.977
SPHK1
Sphingosine kinase 1.
  
 0.977
SPHK1-2
Sphingosine kinase 1.
  
 0.977
plpp2
Phospholipid phosphatase 2a.
    
 0.949
LOC103463553
Phospholipid phosphatase 2b.
    
 0.948
PLPP1
Phospholipid phosphatase 1a.
    
 0.942
LOC103470110
acidPPc domain-containing protein.
    
 0.942
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.