STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)    
Predicted Functional Partners:
LOC103458086
acidPPc domain-containing protein.
    
 0.970
SGPP2
Sphingosine-1-phosphate phosphatase 2.
    
 0.970
LOC103457586
Si:ch211-212g7.6.
    
 0.970
SPHK1
Sphingosine kinase 1.
  
 0.965
plpp2
Phospholipid phosphatase 2a.
    
 0.957
LOC103463553
Phospholipid phosphatase 2b.
    
 0.932
LOC103470110
acidPPc domain-containing protein.
    
 0.927
plpp3
Phospholipid phosphatase 3.
    
 0.927
LOC103478976
acidPPc domain-containing protein.
    
 0.924
LOC103462875
acidPPc domain-containing protein.
    
 0.922
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.