Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC103458072Yip1 domain-containing protein. (447 aa)    
Predicted Functional Partners:
treh
Trehalase.
  
 
 0.924
gak
Cyclin G associated kinase.
     
 0.892
pudp
Pseudouridine 5'-phosphatase.
    
 0.815
yipf2
Yip1 domain family, member 2.
   
 
 0.789
yipf1
Protein YIPF.
   
 
 0.789
yipf3
Yip1 domain family, member 3.
   
 
 0.769
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
  
 
 0.745
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 0.737
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
     
 0.638
LOC103481426
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
   
  
 0.628
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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