STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcbd1Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha. (123 aa)    
Predicted Functional Partners:
qdpr
Quinoid dihydropteridine reductase a.
   
 
 0.983
pah
Phenylalanine hydroxylase.
  
 0.977
LOC103462259
Uncharacterized protein.
  
 0.976
LOC103459397
Tyrosine hydroxylase 2.
  
 0.976
TPH1
Tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a.
  
 0.976
tph2
Tryptophan hydroxylase 2 (tryptophan 5-monooxygenase).
  
 0.976
th
Tyrosine hydroxylase.
  
 0.976
PCBD2
Pterin-4 alpha-carbinolamine dehydratase 2.
  
  
 
0.903
afmid
Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites.
    
 
 0.784
Hnf1b
HNF1 homeobox Ba.
    
 
 0.741
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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