STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464918DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (488 aa)    
Predicted Functional Partners:
LOC103467822
Zgc:193690.
  
  
 
0.901
gle1
GLE1 RNA export mediator.
    
 
 0.877
nup214
Nup214_FG domain-containing protein.
    
 
 0.867
mif4gd
MIF4G domain containing a.
    
   0.866
nxf1
Zgc:153681.
   
 
 0.861
nup88
Nucleoporin 88.
    
 
 0.822
ctif
CBP80/20-dependent translation initiation factor.
    
   0.807
mcm3ap
Minichromosome maintenance complex component 3 associated protein.
   
 
 0.738
zc3h14
Zinc finger CCCH-type containing 14.
   
 
 0.728
dazl
Deleted in azoospermia-like.
   
 
 0.712
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.