STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF4ENIF1Eukaryotic translation initiation factor 4E nuclear import factor 1. (953 aa)    
Predicted Functional Partners:
ENSPREP00000013186
Uncharacterized protein.
   
 0.945
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
   
 0.945
lsm14a
LSM14A mRNA processing body assembly factor b.
   
 
 0.885
LOC103466382
LSM14A mRNA processing body assembly factor a.
   
 
 0.885
LOC103460523
Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.878
LOC103471822
Eukaryotic translation initiation factor 4ea; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.878
LOC103476881
Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.878
cnot1
CCR4-NOT transcription complex, subunit 1.
   
 
 0.860
Eif4e2
Eukaryotic translation initiation factor 4E family member 2; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.808
Lsm14b
LSM14 domain-containing protein.
   
 
 0.785
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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