STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb12Zinc finger and BTB domain containing 12, tandem duplicate 1. (509 aa)    
Predicted Functional Partners:
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 
 0.687
DDAH1
Dimethylarginine dimethylaminohydrolase 1.
     
 0.638
ppt2
Palmitoyl-protein thioesterase 2.
      
 0.629
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.593
RING1
Ring finger protein 1.
    
 0.572
vars2
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 
 0.559
pbk
PDZ binding kinase.
    
  0.552
LOC103457080
Valyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.551
parpbp
PARP1 binding protein.
    
 
 0.545
rrp12
Ribosomal RNA processing 12 homolog.
     
 0.543
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.