STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003320Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (370 aa)    
Predicted Functional Partners:
hamp
Uncharacterized protein.
     
 0.924
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
  
  
 
0.903
LOC103478259
Uncharacterized protein.
     
  0.900
LOC103475683
Hephaestin-like 1b; Belongs to the multicopper oxidase family.
    
 0.729
LOC103463228
Ceruloplasmin; Belongs to the multicopper oxidase family.
    
 0.729
LOC103458559
Cytochrome b reductase 1.
      
 0.605
edil3
EGF-like repeats and discoidin I-like domains 3a.
    
 0.550
LOC103471401
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
    
 0.550
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 0.550
app
Amyloid beta (A4) precursor protein a.
    
 
 0.536
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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