STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480848ATP-binding cassette, sub-family G (WHITE), member 2a. (633 aa)    
Predicted Functional Partners:
LOC103462236
ATP-binding cassette, sub-family G (WHITE), member 2c.
  
  
0.909
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
 0.785
LOC103476915
Uncharacterized protein.
   
 0.751
LOC103476920
Uncharacterized protein.
   
 0.751
abcc5
ATP-binding cassette, sub-family C (CFTR/MRP), member 5.
   
 0.677
ABCC4
ATP binding cassette subfamily C member 4.
   
 0.677
LOC103474464
ATP-binding cassette, sub-family C (CFTR/MRP), member 4.
   
 0.677
abcb10
ATP-binding cassette, sub-family B (MDR/TAP), member 10.
   
 0.637
LOC103464796
ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.
   
 0.618
ENSPREP00000003924
ATP-binding cassette, sub-family E (OABP), member 1.
   
  
 0.595
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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