Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC103467723Zgc:171501. (567 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.536
tk1
Thymidine kinase.
     
  0.518
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.491
sass6
SAS-6 centriolar assembly protein.
      
 0.466
LOC103473229
Occludin a.
      
 0.462
prelid3b
PRELI/MSF1 domain-containing protein.
      
 0.443
LOC103472843
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.411
Cav1
Uncharacterized protein.
      
 0.404
znf335
Zinc finger protein 335.
      
 0.404
Cldn5
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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