STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468062Troponin C type 1b (slow). (161 aa)    
Predicted Functional Partners:
ENSPREP00000018067
Troponin T type 2b (cardiac).
   
 0.977
LOC103467415
Troponin T type 2a (cardiac).
   
 0.977
LOC103465824
Uncharacterized protein.
   
 0.976
ENSPREP00000014606
Uncharacterized protein.
   
 0.976
LOC103464710
Troponin I type 1b (skeletal, slow).
   
 0.962
tnni1
Troponin I type 1a (skeletal, slow).
   
 0.962
LOC103466898
Si:rp71-17i16.4.
  
 
 
0.953
LOC103466900
Troponin C type 2 (fast).
  
 
 
0.953
ENSPREP00000018153
Troponin T type 1 (skeletal, slow).
   
 0.904
tnnt1
Uncharacterized protein.
   
 0.904
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.