STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458078Uncharacterized protein. (1083 aa)    
Predicted Functional Partners:
LOC103475868
Neuroligin 2b.
   
 0.502
LOC103471143
COesterase domain-containing protein.
   
 0.502
ENSPREP00000010128
Neuroligin 3a.
   
 0.502
nlgn1
Neuroligin 1.
   
 0.502
LOC103480578
Neuroligin 2a.
   
 0.502
nlgn4x
Neuroligin 4 X-linked a.
   
 0.502
LOC103475751
Neuroligin 3b.
   
 0.502
LOC103461641
COesterase domain-containing protein.
   
 0.493
lrfn5
Leucine rich repeat and fibronectin type III domain containing 5a.
   
 0.421
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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