Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103462573Cytochrome b-245, alpha polypeptide. (126 aa)    
Predicted Functional Partners:
ncf1
Neutrophil cytosolic factor 1.
   
 0.999
ncf4
Neutrophil cytosolic factor 4.
   
 0.995
LOC103456660
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
   
 0.993
nox4
FAD-binding FR-type domain-containing protein.
   
 0.991
LOC103481003
NADPH oxidase organizer 1b.
    
 0.990
ncf2
Neutrophil cytosolic factor 2.
   
 0.953
ENSPREP00000024849
Uncharacterized protein.
   
 0.953
nox5
NADPH oxidase, EF-hand calcium binding domain 5.
   
 0.916
xkrx
XK-related protein.
   
 0.858
nox1
NADPH oxidase 1.
   
 0.858
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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