STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc30a8Solute carrier family 30 member 8. (399 aa)    
Predicted Functional Partners:
slc30a6
Solute carrier family 30 member 6.
  
 
 
 0.677
Slc30a1
Uncharacterized protein.
  
 
 
 0.644
slc39a13
Solute carrier family 39 member 13.
    
 
 0.626
slc30a9
Solute carrier family 30 member 9.
      
 0.597
LOC103456937
Carrier domain-containing protein.
  
 
 0.576
LOC103456785
Si:dkey-61p9.11.
  
 
 0.576
fasn
Coiled-coil domain containing 57.
  
 
 0.576
slc39a7
Solute carrier family 39 member 7.
    
 
 0.502
slc25a34
Solute carrier family 25 member 34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.501
LOC103475791
Solute carrier family 25 member 35; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.501
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.