STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lgals3bpZgc:112492. (621 aa)    
Predicted Functional Partners:
cant1
Calcium activated nucleotidase 1a.
 
      0.666
LOC103459632
Cytidine monophospho-N-acetylneuraminic acid hydroxylase.
     
 0.580
LOC103465407
Calcium activated nucleotidase 1b.
 
      0.563
gucy1b1
Guanylate cyclase 1 soluble subunit beta 1; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
      
 0.510
impad1
Inositol monophosphatase domain containing 1.
      
 0.495
LOC103470412
VPS37C subunit of ESCRT-I.
      
 0.475
rasl10a
RAS-like, family 10, member A.
      
 0.470
ENSPREP00000018226
NAD(P)-bd_dom domain-containing protein.
      
 0.438
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
      
 0.438
tk1
Thymidine kinase.
      
 0.428
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.