STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCUBMitochondrial calcium uniporter dominant negative beta subunit. (336 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
    
 0.962
micu2
Mitochondrial calcium uptake 2.
    
 0.906
LOC103468189
Single-pass membrane protein with aspartate-rich tail 1b.
    
 0.896
LOC103468431
Single-pass membrane protein with aspartate-rich tail 1a.
    
 0.896
LOC103467247
Mitochondrial calcium uptake family, member 3a.
     
 0.695
LOC103470958
Mitochondrial calcium uptake family, member 3b.
     
 0.695
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.670
phb
Prohibitin.
     
 0.642
ENSPREP00000006614
Prohibitin.
     
 0.604
phb2
Prohibitin.
     
 0.604
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.