STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ext1Exostosin glycosyltransferase 1b; Belongs to the glycosyltransferase 47 family. (694 aa)    
Predicted Functional Partners:
extl2
Exostosin-like glycosyltransferase 2.
    
0.971
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
   
0.937
ext2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
    
 0.902
mdga1
MAM domain containing glycosylphosphatidylinositol anchor 1.
     
 0.519
xbp1
X-box binding protein 1.
     
 0.513
rnpc3
RNA-binding region (RNP1, RRM) containing 3.
      
 0.502
utp23
UTP23 small subunit processome component.
      
 0.495
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.483
csgalnact2
Hexosyltransferase.
      
 0.481
LOC103464268
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.480
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.