STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478952G_PROTEIN_RECEP_F3_4 domain-containing protein. (1281 aa)    
Predicted Functional Partners:
LOC103462170
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.617
gnb5
Guanine nucleotide binding protein (G protein), beta 5a.
   
 0.617
gpr156
G protein-coupled receptor 156.
   
 
 0.570
ATE1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.548
gpr108
G protein-coupled receptor 108.
      
 0.477
LOC103457355
Regulator of G protein signaling 6.
   
  
 0.477
rgs7
Regulator of G protein signaling 7a.
   
  
 0.477
LOC103458511
Uncharacterized protein.
   
  
 0.477
scn1b
Sodium channel, voltage-gated, type I, beta b.
   
  
 0.473
ENSPREP00000024427
IGv domain-containing protein.
   
  
 0.473
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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