STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrpl57Mitochondrial ribosomal protein L57. (103 aa)    
Predicted Functional Partners:
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.973
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.964
mrpl28
Mitochondrial ribosomal protein L28.
    
   0.958
mrpl1
Mitochondrial ribosomal protein L1.
    
 
 0.957
gadd45gip1
Growth arrest and DNA-damage-inducible, gamma interacting protein 1.
   
   0.956
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.950
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.946
mrps30
Mitochondrial ribosomal protein S30.
   
   0.945
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.938
ENSPREP00000014653
Mitochondrial ribosomal protein L39.
    
   0.938
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.