STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tspan11Tetraspanin. (260 aa)    
Predicted Functional Partners:
LOC103469022
Uncharacterized protein; Belongs to the integrin alpha chain family.
    
 0.831
LOC103481979
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 0.831
LOC103460961
Integrin beta.
   
 0.787
itgb4
Integrin, beta 4.
   
 0.787
gramd1c
GRAM domain containing 1c.
    
   0.785
ptgfrn
Uncharacterized protein.
    
 
 0.678
LOC103459402
Nuclear receptor interacting protein 2.
      
 0.635
cmtm6
MARVEL domain-containing protein.
      
 0.591
itga6
Integrin, alpha 6a; Belongs to the integrin alpha chain family.
    
 0.567
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.567
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.