close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003526Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
LOC103471829
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.489
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.472
Lrit3
Uncharacterized protein.
    
 0.472
LOC103476852
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.472
LOC103459016
SLIT and NTRK-like family, member 5b.
   
 0.471
lrtm2
Leucine-rich repeats and transmembrane domains 2a.
   
 0.471
ENSPREP00000009401
LRRCT domain-containing protein.
   
 0.471
ENSPREP00000011179
LRRNT domain-containing protein.
   
 0.471
slit2
Slit homolog 2 (Drosophila).
   
 0.471
LOC103471805
Slit homolog 3 (Drosophila).
   
 0.471
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.