STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sash1SAM and SH3 domain containing 1a. (1155 aa)    
Predicted Functional Partners:
SAMD5
Sterile alpha motif domain containing 5.
 
    
 0.806
NCSTN
Nicastrin.
      
 0.597
pex7
Peroxisomal biogenesis factor 7.
      
 0.597
smad7
Mothers against decapentaplegic homolog.
      
 0.597
LOC103473691
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
      
 0.513
LOC103473263
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
      
 0.513
LOC103473309
Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.
    
 
 0.492
LOC103470277
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
      
 0.479
shc2
SHC (Src homology 2 domain containing) transforming protein 2.
    
 0.439
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.439
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]