STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469794Uncharacterized protein. (1517 aa)    
Predicted Functional Partners:
LOC103472577
Uncharacterized protein.
   
 0.956
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.956
rims1
Regulating synaptic membrane exocytosis 1a.
   
 0.790
LOC103472178
Regulating synaptic membrane exocytosis 3.
   
 0.790
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.714
rimbp2
RIMS binding protein 2.
   
 0.599
LOC103473595
Uncharacterized protein.
   
 0.599
ENSPREP00000011853
Uncharacterized protein.
   
 0.599
LOC103474139
Si:ch211-105f12.2.
   
 0.599
ENSPREP00000005740
PDZ domain-containing protein.
   
 0.589
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.