STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468846TIMP metallopeptidase inhibitor 2b. (206 aa)    
Predicted Functional Partners:
LOC103478877
Matrix metallopeptidase 14b (membrane-inserted).
   
 0.930
LOC103462238
Matrix metallopeptidase 15b.
   
 0.922
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 
 0.809
LOC103467158
Uncharacterized protein.
   
 0.724
LOC103467157
Matrix metallopeptidase 9.
   
 0.724
ENSPREP00000021359
Matrix metallopeptidase 9.
   
 0.724
MMP9
Matrix metallopeptidase 9.
   
 0.724
tgfbr3
Transforming growth factor, beta receptor III.
   
 
 0.659
LOC103474776
Matrix metallopeptidase 20a (enamelysin).
   
 0.657
LOC103474778
Matrix metallopeptidase 13b.
   
 0.657
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.