STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472935Zinc finger and BTB domain containing 22b. (665 aa)    
Predicted Functional Partners:
ENSPREP00000003577
TAP binding protein (tapasin), tandem duplicate 2.
  
 0.623
MAFG
MAF bZIP transcription factor G.
    
 0.608
LOC103471424
Si:ch211-114c17.1.
      
 0.559
psmd3
Proteasome 26S subunit, non-ATPase 3.
    
  0.530
dhx35
DEAH-box helicase 35.
   
 0.500
rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
      
 0.482
MSL3
MSL complex subunit 3.
    
 0.425
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.424
LOC103470619
Multivesicular body subunit 12Bb.
      
 0.418
mvb12b
Multivesicular body subunit 12Ba.
      
 0.418
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.