STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tnrTenascin R (restrictin, janusin). (1241 aa)    
Predicted Functional Partners:
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
    
 0.946
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.946
itga9
Integrin, alpha 9; Belongs to the integrin alpha chain family.
    
 0.946
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.943
LOC103469372
Integrin beta; Belongs to the integrin beta chain family.
    
0.943
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
0.943
itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
0.943
LOC103469607
Tenascin C.
     
0.938
ENSPREP00000029060
Fibronectin type-III domain-containing protein.
     
 0.938
tnxb
Uncharacterized protein.
     
 
0.913
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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