STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003572NTR domain-containing protein. (135 aa)    
Predicted Functional Partners:
ENSPREP00000003536
Complement 4B (Chido blood group).
 
     0.874
LOC103463360
Uncharacterized protein.
   
 0.788
LOC103480967
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.779
C5AR1
Complement C5a receptor 1.
    
 0.683
LOC103474842
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.641
LOC103475468
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.641
c5
Anaphylatoxin-like domain-containing protein.
   
 0.601
c6
Complement component 6.
   
 0.598
c9
Complement component 9.
   
 0.583
ptx3
Pentraxin 3, long b.
    
 
 0.570
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.