STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003577TAP binding protein (tapasin), tandem duplicate 2. (424 aa)    
Predicted Functional Partners:
LOC103479782
Calreticulin.
    
 0.977
LOC103464072
Calreticulin.
    
 0.977
LOC103481747
Transporter associated with antigen processing, subunit type t, teleost specific.
   
 0.975
LOC103472929
Transporter associated with antigen processing, subunit type a.
   
 0.970
LOC103460927
Transporter associated with antigen processing, subunit type a.
   
 0.970
tap1
Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).
   
 0.965
ENSPREP00000008622
Protein disulfide isomerase family A, member 3.
    
 0.960
tapbpl
TAP binding protein like.
  
 
0.927
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
    
 0.890
LOC103472572
Protein disulfide-isomerase.
    
 0.854
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.