STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478953Annexin. (316 aa)    
Predicted Functional Partners:
tfg
Trafficking from ER to golgi regulator.
   
  0.543
LOC103474249
Grancalcin.
   
 
 0.488
sri
Uncharacterized protein.
   
 
 0.488
ENSPREP00000027150
Uncharacterized protein.
   
 
 0.471
stxbp2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.461
LOC103469646
Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.461
LOC103473957
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.461
pdcd6
Programmed cell death 6.
   
 
 0.445
pef1
Penta-EF-hand domain containing 1.
   
 
 0.445
Sod3
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.409
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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