STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474700Arylacetamide deacetylase. (412 aa)    
Predicted Functional Partners:
LOC103459963
Bradykinin receptor B1; Belongs to the G-protein coupled receptor 1 family.
    
 0.871
c1qbp
Complement component 1, q subcomponent binding protein.
    
 0.740
ENSPREP00000007883
Dihydrodiol dehydrogenase (dimeric), like.
  
  
 0.706
LOC103462676
Uncharacterized protein.
  
  
 0.706
HGFAC
HGF activator.
   
 0.677
LOC103460371
Cytochrome c-1.
    
 0.675
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.674
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
    
 
 0.671
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
  
 
 0.644
pmpca
Peptidase (mitochondrial processing) alpha.
    
 
 0.641
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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