SUCNR1 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SUCNR1

Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family. (371 aa)

Predicted Functional Partners:

appbp2

0.605

LOC103475214

0.581

ENSPREP00000007883

0.531

LOC103462676

0.531

gas2

0.512

LOC103475711

0.483

LOC103474700

0.444

nceh1

0.444

LOC103463110

0.444

LOC103456719

0.444

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000007883	LOC103474700	ENSPREP00000007883	ENSPREP00000003589	Dihydrodiol dehydrogenase (dimeric), like.	Arylacetamide deacetylase.	0.706
ENSPREP00000007883	SUCNR1	ENSPREP00000007883	ENSPREP00000003596	Dihydrodiol dehydrogenase (dimeric), like.	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.531
ENSPREP00000007883	appbp2	ENSPREP00000007883	ENSPREP00000022848	Dihydrodiol dehydrogenase (dimeric), like.	Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.	0.585
LOC103456719	SUCNR1	ENSPREP00000033495	ENSPREP00000003596	Uncharacterized protein.	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.444
LOC103456719	appbp2	ENSPREP00000033495	ENSPREP00000022848	Uncharacterized protein.	Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.	0.404
LOC103462676	LOC103474700	ENSPREP00000008123	ENSPREP00000003589	Uncharacterized protein.	Arylacetamide deacetylase.	0.706
LOC103462676	SUCNR1	ENSPREP00000008123	ENSPREP00000003596	Uncharacterized protein.	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.531
LOC103462676	appbp2	ENSPREP00000008123	ENSPREP00000022848	Uncharacterized protein.	Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.	0.585
LOC103463110	SUCNR1	ENSPREP00000033452	ENSPREP00000003596	Kininogen 1.	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.444
LOC103463110	appbp2	ENSPREP00000033452	ENSPREP00000022848	Kininogen 1.	Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.	0.404
LOC103474700	ENSPREP00000007883	ENSPREP00000003589	ENSPREP00000007883	Arylacetamide deacetylase.	Dihydrodiol dehydrogenase (dimeric), like.	0.706
LOC103474700	LOC103462676	ENSPREP00000003589	ENSPREP00000008123	Arylacetamide deacetylase.	Uncharacterized protein.	0.706
LOC103474700	SUCNR1	ENSPREP00000003589	ENSPREP00000003596	Arylacetamide deacetylase.	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.444
LOC103474700	appbp2	ENSPREP00000003589	ENSPREP00000022848	Arylacetamide deacetylase.	Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.	0.404
LOC103475214	SUCNR1	ENSPREP00000029852	ENSPREP00000003596	Hypoxia inducible factor 1 subunit alpha, like.	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.581
LOC103475711	SUCNR1	ENSPREP00000030909	ENSPREP00000003596	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.483
SUCNR1	ENSPREP00000007883	ENSPREP00000003596	ENSPREP00000007883	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	Dihydrodiol dehydrogenase (dimeric), like.	0.531
SUCNR1	LOC103456719	ENSPREP00000003596	ENSPREP00000033495	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.444
SUCNR1	LOC103462676	ENSPREP00000003596	ENSPREP00000008123	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.531
SUCNR1	LOC103463110	ENSPREP00000003596	ENSPREP00000033452	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.	Kininogen 1.	0.444