STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
shcbp1SHC SH2-domain binding protein 1. (685 aa)    
Predicted Functional Partners:
KIF23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.945
LOC103466529
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.945
LOC103464955
Uncharacterized protein.
   
 
 0.887
LOC103460746
Si:ch1073-416j23.1.
   
 
 0.887
racgap1
Rac GTPase activating protein 1.
   
 
 0.887
ncapg
Non-SMC condensin I complex, subunit G.
   
  
 0.885
LOC103481969
Baculoviral IAP repeat containing 5a.
   
  
 0.867
spg21
SPG21 abhydrolase domain containing, maspardin.
      
 0.854
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
    0.846
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
   0.835
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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