STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cttnbp2Cortactin binding protein 2. (1340 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.972
tcp1
T-complex 1.
    
   0.962
cct2
Chaperonin containing TCP1, subunit 2 (beta).
    
   0.962
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.962
cct3
T-complex protein 1 subunit gamma.
    
   0.962
LOC103481920
MOB family member 4, phocein.
    
 
 0.939
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.923
prdm14
PR domain containing 14.
    
   0.915
cct8
Chaperonin containing TCP1, subunit 8 (theta).
    
   0.911
LOC103467452
CTTNBP2 N-terminal like b.
    
 
 0.905
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.