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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cttnbp2Cortactin binding protein 2. (1340 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.955
cct2
Chaperonin containing TCP1, subunit 2 (beta).
    
   0.945
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.945
tcp1
T-complex 1.
    
   0.944
cct3
T-complex protein 1 subunit gamma.
    
   0.944
LOC103481920
MOB family member 4, phocein.
    
 
 0.921
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.892
LOC103467452
CTTNBP2 N-terminal like b.
    
 
0.873
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
    
   0.872
cttnbp2nl
CTTNBP2 N-terminal like a.
    
  
0.872
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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