STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
setbp1SET binding protein 1. (1512 aa)    
Predicted Functional Partners:
ENSPREP00000012507
HARE-HTH domain-containing protein.
    
 0.653
nek4
NIMA-related kinase 4.
    
 
 0.638
MSL3
MSL complex subunit 3.
  
 
 0.619
prdm16
Si:ch211-263k4.2.
   
 0.619
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
      
 0.600
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.585
cwf19l2
CWF19 like cell cycle control factor 2.
   
  
 0.583
ephx2
Epoxide hydrolase 2, cytoplasmic.
   
  
 0.582
ENSPREP00000030719
Uncharacterized protein.
   
  
 0.570
LOC103475798
Lysine (K)-specific demethylase 6A, like.
   
 0.560
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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