STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458637L-threonine dehydrogenase 2. (308 aa)    
Predicted Functional Partners:
ENSPREP00000022258
Glycine C-acetyltransferase.
  
 
 0.955
LOC103477344
PALP domain-containing protein.
   
 
 0.939
LOC103460681
Serine dehydratase-like.
   
 
 0.923
SDS
Serine dehydratase.
   
 
 0.923
LOC103457629
L-threonine dehydrogenase.
  
  
 
0.901
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.840
ivd
Isovaleryl-CoA dehydrogenase.
   
 
 0.712
NUP62
Nucleoporin 62.
    
   0.707
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.648
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.638
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.