STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cbx8Chromobox homolog 8b. (381 aa)    
Predicted Functional Partners:
cbx4
Chromobox 4.
    
0.976
LOC103469229
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
0.976
Phc1
Uncharacterized protein.
    
 0.971
rnf2
Ring finger protein 2.
    
 0.960
RING1
Ring finger protein 1.
    
 0.960
LOC103481889
Chromo domain-containing protein.
    
0.956
PCGF2
Polycomb group ring finger 2.
    
 0.952
ENSPREP00000022294
Bmi1 polycomb ring finger oncogene 1a.
    
 0.952
phc2
Polyhomeotic homolog 2b (Drosophila).
    
 0.917
pcgf1
Polycomb group ring finger 1.
    
 0.912
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.