STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003696Si:dkey-31g6.6. (84 aa)    
Predicted Functional Partners:
LOC103471126
RUN and FYVE domain containing 1.
      
 0.758
Szt2
Uncharacterized protein.
      
 0.614
dgke
Diacylglycerol kinase.
      
 0.604
LOC103466710
Carbonic anhydrase Va; Belongs to the alpha-carbonic anhydrase family.
      
 0.587
scpep1
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.583
ENSPREP00000033999
Otospiralin.
      
 0.531
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
      
 0.530
ankfn1
Uncharacterized protein.
      
 0.513
LOC103468436
Fibronectin type-III domain-containing protein.
      
 0.513
LOC103465435
Synaptogyrin.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.