STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003700Fibrinogen C-terminal domain-containing protein. (554 aa)    
Predicted Functional Partners:
ENSPREP00000032122
Uncharacterized protein.
 
   
  0.897
stk19
Serine/threonine kinase 19.
      
 0.604
col6a1
Collagen, type VI, alpha 1.
   
  
 0.500
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.472
mcrs1
Microspherule protein 1.
    
 0.467
ENSPREP00000013251
Microfibril associated protein 5.
   
 
 0.446
fbln5
Fibulin 5.
   
 0.407
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.404
Tex30
Testis expressed 30.
    
 0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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