STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fbxo22F-box protein 22. (244 aa)    
Predicted Functional Partners:
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
    
  0.903
LOC103457805
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
    
  0.903
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.894
naa25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
   
 
 0.551
ENSPREP00000024682
KxDL motif containing 1.
   
   0.504
LOC103465649
Troponin T type 3a (skeletal, fast).
   
 0.503
LOC103465824
Uncharacterized protein.
   
 0.503
ENSPREP00000014606
Uncharacterized protein.
   
 0.503
smim20
Small integral membrane protein 20.
   
 0.503
gatd1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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