Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103467951G patch domain and KOW motifs. (323 aa)    
Predicted Functional Partners:
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
    
 0.998
ENSPREP00000025430
BUD13 homolog.
   
 
 0.988
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.987
Prpf4
WD_REPEATS_REGION domain-containing protein.
   
 0.963
ppil4
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
 0.959
cwc22
CWC22 spliceosome associated protein homolog.
    
 0.958
prpf8
Pre-mRNA processing factor 8.
    
 
 0.941
cwc27
CWC27 spliceosome associated cyclophilin.
    
 0.939
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.906
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
  0.906
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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