STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473459Uncharacterized protein. (1072 aa)    
Predicted Functional Partners:
mtrf1l
Mitochondrial translational release factor 1-like.
      
 0.652
igfals
Insulin-like growth factor binding protein, acid labile subunit.
    
 0.603
rpl6
Ribosomal protein L6.
    
   0.586
LOC103479288
Microtubule-associated protein.
  
 
   0.529
tent5d
Uncharacterized protein.
  
     0.477
ENSPREP00000027516
Mitochondrial translational release factor 1.
      
 0.476
LOC103460636
Uncharacterized protein.
  
     0.444
ncan
Neurocan b.
  
 
  0.443
ENSPREP00000014094
NDK domain-containing protein.
    
 0.433
LOC103477989
Atrophin 1.
  
     0.432
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.