STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dlg5Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family. (1988 aa)    
Predicted Functional Partners:
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.793
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.793
ENSPREP00000008137
PDZ domain-containing protein.
    
 0.584
shank1
SH3 and multiple ankyrin repeat domains 1.
    
 0.584
Shank1
SAM domain-containing protein.
    
 0.584
LOC103466031
SH3 and multiple ankyrin repeat domains 3a.
    
 0.584
LOC103463007
SH3 and multiple ankyrin repeat domains 2a.
    
 0.584
LOC103481054
Uncharacterized protein.
    
 0.584
LOC103460558
Uncharacterized protein.
   
 0.552
LOC103473962
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.552
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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