STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tial1TIA1 cytotoxic granule-associated RNA binding protein-like 1. (382 aa)    
Predicted Functional Partners:
ENSPREP00000008610
RRM domain-containing protein.
  
 0.839
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.770
srsf2
Serine and arginine rich splicing factor 2a.
  
0.757
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
  
 0.754
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.748
ENSPREP00000018529
FIP1 like 1b (S. cerevisiae).
   
 0.746
snrpg
Small nuclear ribonucleoprotein G.
   
 0.744
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.741
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.741
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.738
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.