LOC103472243 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC103472243

Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)

Predicted Functional Partners:

LOC103464516

0.993

gnb1

0.993

gnat1

0.988

LOC103467179

0.984

LOC103464572

0.931

LOC103464571

0.931

RHO

0.931

rho

0.931

LOC103481632

0.926

LOC103468274

0.926

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103464516	LOC103464571	ENSPREP00000006363	ENSPREP00000004006	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Rhodopsin.	0.842
LOC103464516	LOC103464572	ENSPREP00000006363	ENSPREP00000003937	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Rhodopsin.	0.842
LOC103464516	LOC103467179	ENSPREP00000006363	ENSPREP00000021938	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.987
LOC103464516	LOC103468274	ENSPREP00000006363	ENSPREP00000016895	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Regulator of G protein signaling 9a.	0.962
LOC103464516	LOC103472243	ENSPREP00000006363	ENSPREP00000003752	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.993
LOC103464516	LOC103481632	ENSPREP00000006363	ENSPREP00000013749	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Regulator of G protein signaling 9b.	0.962
LOC103464516	RHO	ENSPREP00000006363	ENSPREP00000022363	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Extra-ocular rhodopsin.	0.842
LOC103464516	gnat1	ENSPREP00000006363	ENSPREP00000005925	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.987
LOC103464516	gnb1	ENSPREP00000006363	ENSPREP00000015702	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.900
LOC103464516	rho	ENSPREP00000006363	ENSPREP00000024057	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).	0.842
LOC103464571	LOC103464516	ENSPREP00000004006	ENSPREP00000006363	Rhodopsin.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.842
LOC103464571	LOC103467179	ENSPREP00000004006	ENSPREP00000021938	Rhodopsin.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.966
LOC103464571	LOC103472243	ENSPREP00000004006	ENSPREP00000003752	Rhodopsin.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.931
LOC103464571	gnat1	ENSPREP00000004006	ENSPREP00000005925	Rhodopsin.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.964
LOC103464571	gnb1	ENSPREP00000004006	ENSPREP00000015702	Rhodopsin.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.842
LOC103464572	LOC103464516	ENSPREP00000003937	ENSPREP00000006363	Rhodopsin.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.842
LOC103464572	LOC103467179	ENSPREP00000003937	ENSPREP00000021938	Rhodopsin.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.966
LOC103464572	LOC103472243	ENSPREP00000003937	ENSPREP00000003752	Rhodopsin.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.931
LOC103464572	gnat1	ENSPREP00000003937	ENSPREP00000005925	Rhodopsin.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.964
LOC103464572	gnb1	ENSPREP00000003937	ENSPREP00000015702	Rhodopsin.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.842

page 1 of 5

Server load: medium (48%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About