STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468839BAH domain and coiled-coil containing 1a. (2888 aa)    
Predicted Functional Partners:
LOC103466071
SIN3-HDAC complex associated factor.
    
 
 0.915
LOC103462457
SIN3-HDAC complex associated factor, like.
    
 
 0.741
sap30l
Sap30-like.
    
 
 0.730
Unc79
Uncharacterized protein.
    
 0.654
LOC103462700
SIN3 transcription regulator family member Ab.
   
 0.629
sin3a
SIN3 transcription regulator family member Aa.
   
 0.629
sin3b
SIN3 transcription regulator family member B.
   
 0.629
dnpep
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
    
 
 0.601
mrpl54
Mitochondrial ribosomal protein L54.
      
 0.577
ing1
Inhibitor of growth protein.
    
  0.576
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.